Survival-associated meQTLs across different cancer types


We identified 23,432 meQTLs associated with patient overall survival across different cancer types at FDR < 0.05.


e.g., "BLCA"
e.g., "rs11600543"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
log-rank test p-value
Sample size
Median survival time AA
Median survival time Aa
Median survival time aa
Dispaly
LAML rs113971906 chr6:134280542 A/G 0.000172 109 16.17 10.13 1 KM Plot
LAML rs113998461 chr5:25962332 C/A 0.000145 111 15.17 16.17 0 KM Plot
LAML rs114032116 chr6:34468333 C/T 0.000168 106 16.27 8.1 0 KM Plot
LAML rs11451134 chr11:34293950 C/CT 0.000118 111 13.2 16.3 0 KM Plot
LAML rs114542481 chr5:25965895 G/A 0.000145 111 15.17 16.17 0 KM Plot
LAML rs114769273 chr5:25936931 G/A 0.000145 111 15.17 16.17 0 KM Plot
LAML rs115238432 chr2:174138387 C/T 8.79E-5 108 17.77 9.13 0 KM Plot
LAML rs11532433 chr12:47825390 C/T 0.000154 109 15.23 12.2 0 KM Plot
LAML rs115370576 chr16:16321762 C/T 0.000128 110 17.23 10.65 0 KM Plot
LAML rs11539461 chr14:77935659 G/A 0.000164 111 13.1 21.78 1.02 KM Plot
LAML rs11560908 chr11:58434545 A/C 1.63E-5 111 4.58 11.13 18.75 KM Plot
LAML rs115813933 chr6:134309513 C/T 0.000105 108 16.17 9.12 1 KM Plot
LAML rs11590093 chr1:95421444 G/A 9.8E-5 110 12.65 22.37 0 KM Plot
LAML rs11592060 chr10:79017064 C/T 0.000118 111 0 15.73 14.22 KM Plot
LAML rs11594350 chr10:78975080 G/A 7.34E-5 111 13.15 18.78 0 KM Plot